peter145 wrote:
oh ok... are the ones that need to be crossed over are adafruit Ultimate breakout GPS?
would it affect if I crossover the Rx Tx with my current GPS module?
I noticed something in the Schematic diagram I encircled it here: does that affect the Crossovering of the Rx and Tx?
http://imageshack.com/a/img4/6766/bwuv.png

Woah, trigger! When did the Adafruit Ultimate Breakout GPS appear? Let's stick to the original device.
So, let's say you have two devices, A and B. And they have serial ports on them. The typical serial port is three pins: transmitted data (Tx), received data (Rx) and ground (GND). Usually you expect to connect Tx (data out) from device A to Rx (data in) of device B, and vice versa. And connect the GND pins together, of course.
Unfortunately the naming convention is not rigorous, and sometimes, the name is misleading, or unconventional, or different, or wrong. Sometimes Tx means 'data out', and sometimes it means 'connect the Tx line from the other end here'. When I am looking at schematics I prefer to note them as 'data out' and 'data in', once I have figured out the sense of the pins.
When I looked at the data sheet in detail I saw that the pin labelled Tx is actually connected to GPSRx, and vice versa. Which means that the sense of the Tx pin is different to what the name suggests. So, connect Tx on the Pi to Tx on the module, and Rx on the Pi to Rx on the module. Make sure the module is set for 3.3V logic before you do this.
I don't know what S2 is for. It switches between the hardware UART of the GPS module and a secondary software UART. There is not enough information about these two ports, so I suggest you leave S2 in the hardware UART position (this is the upward position shown on the diagram, but how it appears on the physical board I don't know).
Ok, now looking at the Adafruit device, the Tx and Rx pins are marked as I expect them to be, so for *that* module, connect Tx on the Pi to Rx on the module, and Rx on the Pi to Tx on the module. This is explained in the tutorial linked from that product.